Database

Organism List

Representative organisms, sorted by number of known&predicted protein interactions:

• Saccharomyces cerevisiae
• Homo sapiens
• Mus musculus
• Arabidopsis thaliana
• Rattus norvegicus
• Drosophila melanogaster
• Escherichia coli
• Danio rerio
• Zea mays
• Oryza sativa
• Sus scrofa
• Caenorhabditis elegans
• Canis familiaris
• Candida albicans
• Bos taurus
• Solanum tuberosum
• Mycobacterium tuberculosis
• Gallus gallus
• Staphylococcus aureus
• Glycine max
• Listeria monocytogenes
• Thermus thermophilus HB8
• Macaca mulatta
• Schizosaccharomyces pombe
• Picea abies
• Escherichia coli K12
• Salmonella enterica
• Pan troglodytes
• Oncorhynchus mykiss
• Solanum lycopersicum
• Pseudomonas aeruginosa
• Bradyrhizobium japonicum USDA 110
• Salmonella enterica subsp. enterica serovar Typhimurium
• Ovis aries
• Plasmodium falciparum
• Streptococcus agalactiae
• Porphyromonas gingivalis
• Bacteroides thetaiotaomicron
• Campylobacter jejuni
• Lactobacillus reuteri F275
• Bacillus subtilis subsp. subtilis str. 168
• Pseudomonas aeruginosa PAO1
• Emericella nidulans
• Montastraea faveolata
• Candida dubliniensis
• Micropterus salmoides
• Viruses
• Haematobia irritans
• Schistosoma mansoni
• Toxoplasma gondii
• Entamoeba histolytica
• Saccharomyces bayanus
• Hordeum vulgare
• Medicago truncatula
• Bacillus subtilis
• Haemophilus influenzae
• Actinobacillus pleuropneumoniae
• Rhipicephalus microplus
• Haemophilus influenzae R2866
• Xenopus
• Lactobacillus plantarum WCFS1
• Shewanella oneidensis MR-1
• Caulobacter vibrioides
• Pimephales promelas
• Mycobacterium tuberculosis H37Rv
• Coregonus clupeaformis
• Vitis vinifera
• Mus spretus
• Mesocricetus auratus
• Xenopus laevis
• Fundulus heteroclitus
• Schistosoma japonicum
• Leishmania major
• Trichophyton rubrum
• Aspergillus fumigatus
• Triticum aestivum
• Populus trichocarpa x Populus deltoides
• Gossypium barbadense
• Chlamydomonas reinhardtii
• Citrus sinensis
• Lactobacillus reuteri
• Streptococcus pyogenes
• Streptococcus mutans
• Synechocystis sp. PCC 6803
• Nitrosomonas europaea
• Pasteurella multocida
• Vibrio parahaemolyticus
• Salmonella typhimurium
• Neisseria gonorrhoeae
• Legionella pneumophila
• Bradyrhizobium japonicum
• Francisella tularensis
• Escherichia coli str. K12 substr. MG1655
• Staphylococcus aureus subsp. aureus str. Newman
• Lens culinaris subsp. culinaris
• Magnaporthe oryzae
• Escherichia coli W3110
• Streptococcus pyogenes MGAS5005
• Salmonella enterica subsp. enterica serovar Emek
• Rickettsia prowazekii str. Madrid E
• Rickettsia conorii str. Malish 7
• Rhodobacter sphaeroides 2.4.1
• Lactobacillus acidophilus NCFM
• Bacteroides fragilis NCTC 9343
• Exiguobacterium sibiricum 255-15
• Psychrobacter arcticus 273-4
• Rhodopseudomonas palustris CGA009
• Dehalococcoides ethenogenes 195
• Enterococcus faecalis V583
• Salmonella enterica subsp. enterica serovar Java
• Vibrio vulnificus CMCP6
• Anaplasma phagocytophilum HZ
• Streptococcus mutans UA159
• Candidatus Blochmannia floridanus
• Lactococcus lactis subsp. hordniae
• Escherichia coli CFT073
• Leptospira interrogans serovar Lai str. 56601
• Mus musculus x Mus spretus
• Nicotiana langsdorffii x Nicotiana sanderae
• Staphylococcus aureus subsp. aureus Mu50
• Folsomia candida
• uncultured organism
• Escherichia coli O157:H7 EDL933
• Salmonella enterica subsp. enterica serovar Enteritidis
• Magnaporthe grisea
• Staphylococcus saprophyticus subsp. saprophyticus
• Poliovirus
• Salmonella enterica subsp. enterica serovar Choleraesuis
• Salmonella enterica subsp. enterica serovar Montevideo
• Haliotis asinina
• Salmonella enterica subsp. enterica serovar Newport
• Xenopus muelleri
• Postia placenta
• Rhodococcus sp. RHA1
• Salmonella enterica subsp. enterica serovar Dublin
• Salmonella enterica subsp. enterica serovar Typhi
• Bubalus bubalis
• Monosiga brevicollis
• Schmidtea mediterranea
• Hordeum vulgare subsp. spontaneum
• Citrobacter rodentium
• Halobacterium sp. NRC-1
• Chlorocebus sabaeus
• Pseudomonas resinovorans
• Dreissena polymorpha
• Nematostella vectensis
• Acropora millepora
• Caldicellulosiruptor saccharolyticus
• Metallosphaera sedula
• Actinosynnema pretiosum
• Bruguiera gymnorhiza
• Human herpesvirus 8
• Streptococcus sp. 'group A'
• Daphnia magna
• Dermacentor andersoni
• Gossypium longicalyx
• Gossypium herbaceum
• unidentified
• Pectobacterium atrosepticum
• Brucella melitensis
• Crassostrea gigas
• Human adenovirus type 40
• Solenopsis invicta
• Flock house virus
• Influenza A virus
• Human herpesvirus 4
• Trichoplax adhaerens
• Phodopus sungorus
• Marmota monax
• Oryctolagus cuniculus
• Equus caballus
• Canis lupus
• Macaca fascicularis
• Xenopus borealis
• Hippoglossus hippoglossus
• Gillichthys mirabilis
• Astatotilapia burtoni
• Salmo salar
• Ictalurus punctatus
• Cyprinus carpio
• Drosophila yakuba
• Bemisia tabaci
• Locusta migratoria
• Ixodes scapularis
• Tetrahymena thermophila
• Plasmodium vivax
• Leishmania infantum
• Candida glabrata
• Filobasidiella neoformans
• Neurospora crassa
• Gibberella fujikuroi
• Penicillium chrysogenum
• Aspergillus niger
• Blastocladiella emersonii
• Saccharum officinarum
• Nicotiana tabacum
• Nicotiana sylvestris
• Vigna unguiculata
• Cicer arietinum
• Arachis hypogaea
• Populus deltoides
• Populus trichocarpa
• Populus nigra
• Populus x canadensis
• Citrullus lanatus
• Gossypium hirsutum
• Humulus lupulus
• Pinus contorta
• Physcomitrella patens
• Sulfolobus solfataricus
• Streptomyces rimosus
• Lactobacillus plantarum
• Clostridium botulinum
• Lactococcus lactis subsp. lactis
• Lactococcus lactis subsp. cremoris
• Lactococcus lactis
• Streptococcus pneumoniae
• Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
• Chlamydia trachomatis
• Shigella flexneri
• Pectobacterium carotovorum
• Zymomonas mobilis
• Pseudomonas putida
• Francisella tularensis subsp. novicida
• Helicobacter pylori
• Borrelia burgdorferi
• Myxococcus xanthus
• marine metagenome
• Oryza sativa Japonica Group
• Geobacter uraniireducens Rf4
• Xanthomonas oryzae pv. oryzae PXO99A
• Amphimedon queenslandica
• Xenopus laevis x Xenopus borealis