Database

Organism List

Representative organisms, sorted by number of known&predicted protein interactions:

Saccharomyces cerevisiae
Homo sapiens
Mus musculus
Arabidopsis thaliana
Rattus norvegicus
Drosophila melanogaster
Escherichia coli
Danio rerio
Zea mays
Oryza sativa
Sus scrofa
Caenorhabditis elegans
Canis familiaris
Candida albicans
Bos taurus
Solanum tuberosum
Mycobacterium tuberculosis
Gallus gallus
Staphylococcus aureus
Glycine max
Listeria monocytogenes
Thermus thermophilus HB8
Macaca mulatta
Schizosaccharomyces pombe
Picea abies
Escherichia coli K12
Salmonella enterica
Pan troglodytes
Oncorhynchus mykiss
Solanum lycopersicum
Pseudomonas aeruginosa
Bradyrhizobium japonicum USDA 110
Salmonella enterica subsp. enterica serovar Typhimurium
Ovis aries
Plasmodium falciparum
Streptococcus agalactiae
Porphyromonas gingivalis
Bacteroides thetaiotaomicron
Campylobacter jejuni
Lactobacillus reuteri F275
Bacillus subtilis subsp. subtilis str. 168
Pseudomonas aeruginosa PAO1
Emericella nidulans
Montastraea faveolata
Candida dubliniensis
Micropterus salmoides
Viruses
Haematobia irritans
Schistosoma mansoni
Toxoplasma gondii
Entamoeba histolytica
Saccharomyces bayanus
Hordeum vulgare
Medicago truncatula
Bacillus subtilis
Haemophilus influenzae
Actinobacillus pleuropneumoniae
Rhipicephalus microplus
Haemophilus influenzae R2866
Xenopus
Lactobacillus plantarum WCFS1
Shewanella oneidensis MR-1
Caulobacter vibrioides
Pimephales promelas
Mycobacterium tuberculosis H37Rv
Coregonus clupeaformis
Vitis vinifera
Mus spretus
Mesocricetus auratus
Xenopus laevis
Fundulus heteroclitus
Schistosoma japonicum
Leishmania major
Trichophyton rubrum
Aspergillus fumigatus
Triticum aestivum
Populus trichocarpa x Populus deltoides
Gossypium barbadense
Chlamydomonas reinhardtii
Citrus sinensis
Lactobacillus reuteri
Streptococcus pyogenes
Streptococcus mutans
Synechocystis sp. PCC 6803
Nitrosomonas europaea
Pasteurella multocida
Vibrio parahaemolyticus
Salmonella typhimurium
Neisseria gonorrhoeae
Legionella pneumophila
Bradyrhizobium japonicum
Francisella tularensis
Escherichia coli str. K12 substr. MG1655
Staphylococcus aureus subsp. aureus str. Newman
Lens culinaris subsp. culinaris
Magnaporthe oryzae
Escherichia coli W3110
Streptococcus pyogenes MGAS5005
Salmonella enterica subsp. enterica serovar Emek
Rickettsia prowazekii str. Madrid E
Rickettsia conorii str. Malish 7
Rhodobacter sphaeroides 2.4.1
Lactobacillus acidophilus NCFM
Bacteroides fragilis NCTC 9343
Exiguobacterium sibiricum 255-15
Psychrobacter arcticus 273-4
Rhodopseudomonas palustris CGA009
Dehalococcoides ethenogenes 195
Enterococcus faecalis V583
Salmonella enterica subsp. enterica serovar Java
Vibrio vulnificus CMCP6
Anaplasma phagocytophilum HZ
Streptococcus mutans UA159
Candidatus Blochmannia floridanus
Lactococcus lactis subsp. hordniae
Escherichia coli CFT073
Leptospira interrogans serovar Lai str. 56601
Mus musculus x Mus spretus
Nicotiana langsdorffii x Nicotiana sanderae
Staphylococcus aureus subsp. aureus Mu50
Folsomia candida
uncultured organism
Escherichia coli O157:H7 EDL933
Salmonella enterica subsp. enterica serovar Enteritidis
Magnaporthe grisea
Staphylococcus saprophyticus subsp. saprophyticus
Poliovirus
Salmonella enterica subsp. enterica serovar Choleraesuis
Salmonella enterica subsp. enterica serovar Montevideo
Haliotis asinina
Salmonella enterica subsp. enterica serovar Newport
Xenopus muelleri
Postia placenta
Rhodococcus sp. RHA1
Salmonella enterica subsp. enterica serovar Dublin
Salmonella enterica subsp. enterica serovar Typhi
Bubalus bubalis
Monosiga brevicollis
Schmidtea mediterranea
Hordeum vulgare subsp. spontaneum
Citrobacter rodentium
Halobacterium sp. NRC-1
Chlorocebus sabaeus
Pseudomonas resinovorans
Dreissena polymorpha
Nematostella vectensis
Acropora millepora
Caldicellulosiruptor saccharolyticus
Metallosphaera sedula
Actinosynnema pretiosum
Bruguiera gymnorhiza
Human herpesvirus 8
Streptococcus sp. 'group A'
Daphnia magna
Dermacentor andersoni
Gossypium longicalyx
Gossypium herbaceum
unidentified
Pectobacterium atrosepticum
Brucella melitensis
Crassostrea gigas
Human adenovirus type 40
Solenopsis invicta
Flock house virus
Influenza A virus
Human herpesvirus 4
Trichoplax adhaerens
Phodopus sungorus
Marmota monax
Oryctolagus cuniculus
Equus caballus
Canis lupus
Macaca fascicularis
Xenopus borealis
Hippoglossus hippoglossus
Gillichthys mirabilis
Astatotilapia burtoni
Salmo salar
Ictalurus punctatus
Cyprinus carpio
Drosophila yakuba
Bemisia tabaci
Locusta migratoria
Ixodes scapularis
Tetrahymena thermophila
Plasmodium vivax
Leishmania infantum
Candida glabrata
Filobasidiella neoformans
Neurospora crassa
Gibberella fujikuroi
Penicillium chrysogenum
Aspergillus niger
Blastocladiella emersonii
Saccharum officinarum
Nicotiana tabacum
Nicotiana sylvestris
Vigna unguiculata
Cicer arietinum
Arachis hypogaea
Populus deltoides
Populus trichocarpa
Populus nigra
Populus x canadensis
Citrullus lanatus
Gossypium hirsutum
Humulus lupulus
Pinus contorta
Physcomitrella patens
Sulfolobus solfataricus
Streptomyces rimosus
Lactobacillus plantarum
Clostridium botulinum
Lactococcus lactis subsp. lactis
Lactococcus lactis subsp. cremoris
Lactococcus lactis
Streptococcus pneumoniae
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Chlamydia trachomatis
Shigella flexneri
Pectobacterium carotovorum
Zymomonas mobilis
Pseudomonas putida
Francisella tularensis subsp. novicida
Helicobacter pylori
Borrelia burgdorferi
Myxococcus xanthus
marine metagenome
Oryza sativa Japonica Group
Geobacter uraniireducens Rf4
Xanthomonas oryzae pv. oryzae PXO99A
Amphimedon queenslandica
Xenopus laevis x Xenopus borealis